==================================================
file name: RM2_intron3_HPSE2_1294768039
sequences:             1
total length:     400181 bp  (400181 bp excl N/X-runs)
GC level:         37.45 %
bases masked:     260659 bp ( 65.14 %)
==================================================
               number of      length   percentage
               elements*    occupied  of sequence
--------------------------------------------------
SINEs:              169        36924 bp    9.23 %
      ALUs           86        24584 bp    6.14 %
      MIRs           81        11835 bp    2.96 %

LINEs:              185       174715 bp   43.66 %
      LINE1         120       159223 bp   39.79 %
      LINE2          52        12226 bp    3.06 %
      L3/CR1         12         2717 bp    0.68 %

LTR elements:        45        23607 bp    5.90 %
      ERVL           13         6470 bp    1.62 %
      ERVL-MaLRs     24        10453 bp    2.61 %
      ERV_classI      7         5675 bp    1.42 %
      ERV_classII     1         1009 bp    0.25 %

DNA elements:        73        20922 bp    5.23 %
     hAT-Charlie     42         9659 bp    2.41 %
     TcMar-Tigger    17         8793 bp    2.20 %

Unclassified:         3          628 bp    0.16 %

Total interspersed repeats:   256796 bp   64.17 %


Small RNA:            0            0 bp    0.00 %

Satellites:           0            0 bp    0.00 %
Simple repeats:      44         2370 bp    0.59 %
Low complexity:      35         1493 bp    0.37 %
==================================================

* most repeats fragmented by insertions or deletions
  have been counted as one element
                                                      

The query species was assumed to be homo          
RepeatMasker version open-3.2.9 , default mode
                                   
run with blastp version 3.0SE-AB [2009-10-30] [linux26-x64-I32LPF64 2009-10-30T17:06:09]
RepBase Update 20090604, RM database version 20090604